Make sure the new folders are giving then right permissions. I've included a couple links for reference.
https://stackoverflow.com/questions/11162430/401-unauthorized-on-a-directory
Could also try looking at the accepted answer on this post as well.
https://serverfault.com/questions/104585/iis-doesnt-serve-certain-file-extensions
Let me know if these don't work maybe there is something else that can be done.
Matt Petty
Senior Software Developer
SmarterTools Inc.
www.smartertools.com