Emails Missing
Problem reported by Ardalan Afshar - 9/29/2026 at 8:53 AM
Submitted
Hello.

We are using Smartermail with Outlook Classic via MAPI/EWS.
Sadly we are missing some Emails. For example a User sends email, It is in receiver's Inbox but it is not in sender's Sent Items or vice versa (Its in Sent Items but not in receiver's Inbox)

We have 450 Users with high mail Transfers.
I have checked logs. Here is sample log that shows message has been sent and other side received it. But it is not in sender's Sent Items.

[2026.09.26] 12:48:48.258 [41574352] Delivery started for a.kheiri@mydomain.com at 12:48:48 PM
[2026.09.26] 12:48:54.304 [41574352] Delivery for a.kheiri@mydomain.com to Sales@mydomain.com has completed (Delivered) Filter: None
[2026.09.26] 12:48:57.302 [41574352] Delivery finished for a.kheiri@mydomain.com at 12:48:57 PM    [id:41574352]

Due to huge transactions, I can't Enable Detailed Log for MAPI/EWS. In seconds log file gets big and mail server Stops.
I wanted to check log during Maintenance window, But everythings worked fine.

Is there any way to track why this happens?

terry fairbrother Replied
Sounds similar to an issue that came up a few weeks ago and also yesterday.

Shared mailbox, user 1 moves emails from inbox to subfolder. Emails don't replicate to SM so user 2 see's what the server sees (and I see via impersonation). 

So what I did last night was make a new profile for user 1 and resync all the emails. Last time I deleted the OST and let it resync. However what I also noticed was user 1's Outlook hadn't talked to SM for several hours (the last update message at the bottom of Outlook). But an Outlook restart didn't resync / update the differences either.
Ardalan Afshar Replied
Its not shared Mail Box.
User mail box is about 20 GB. Its really hard to remove and resync.
MattyT Replied
I had/have a somewhat similar issue with messages disappearing from the inbox (rarely) upon a user clicking reply to a new message in the inbox. Users on one domain alone noticing it. Outlook/MAPI only. Customers have seen it happen while watching their inbox. The original message just disappears without a trace but there are no errors on the server. The missing emails can be restored from the archive, though. I opened tickets about the issue and it is still inconclusive after investigation both by me and ST support. There is evidence pointing to the endpoint antivirus Outlook plugin removing the messages but not logging it. What are the endpoints using for AV, and is there an Outlook plugin for it?
Brandon Murphy Replied
Employee Post
Hello,

Since your delivery log files are indicating the message was successfully delivered, can you confirm if you're seeing the message in the users 'Sent Items' folder in the webmail interface? Has this issue ocurred when the user sends from the webmail interface? If you're seeing this message in the webmail interface but not in Outlook, this is likely related to the MAPI sync protocol/Outlook. Are you seeing anything in the recipients Sync Issues folder in Outlook? An error code here may point us in the right direction.

Does this issue happen with every message or is it intermittent? Do you have active maintenance and support with us? If you open a support ticket we can further assist you in troubleshooting this issue.

Thank you,
Brandon Murphy
System/Network Administrator
SmarterTools Inc.
MattyT Replied
Hi Brandon,

If you were referring to my post, yes, I've opened a few tickets about the issue over the past year or longer. I'd be happy to open another ticket about but due to the intermittent nature of it, and un-reproduceable nature, it's hard to track down. I have copious notes and all the data from the past tickets (which you would have access to as well). Sorry for cluttering up another user's problem thread...

Matt
Thomas Sangster Replied

Here are some troubleshooting steps I would recommend:

  1. Check Outlook’s Sent Items settings: In Outlook Classic, go to File → Options → Mail and check the option to save copies of messages in the Sent Items folder. Also check whether any Outlook rules or add-ins are moving or deleting sent messages.
  2. Compare webmail with Outlook: After sending a test email, check the sender’s Sent Items folder in SmarterMail webmail and Outlook. If the message appears in webmail but not Outlook, investigate MAPI/EWS synchronization, cached data, and the Outlook profile. If it is missing in both, investigate the server-side submission and Sent Items storage process.
  3. Check SmarterMail logs: Review the SMTP, delivery, and MAPI/EWS logs for the same message and timestamp. Your sample delivery log proves delivery to the recipient, but it does not establish whether a Sent Items copy was created or synchronized.
  4. Enable targeted logging during a controlled test: Instead of enabling detailed MAPI/EWS logging for all 450 users, coordinate with SmarterTools support to determine whether logging can be restricted to a specific user, session, or short time window. Capture logs only for a few affected accounts and disable verbose logging immediately afterward.
  5. Check Outlook synchronization errors: Review the Outlook Sync Issues folders and relevant Windows Event Viewer entries. Also check whether affected users experience the problem on multiple computers or only on one Outlook profile.
  6. Investigate the reverse scenario: If a message appears in Sent Items but is missing from the recipient’s Inbox, search the SMTP logs using the message ID and timestamp. Check for delivery failures, filtering, spam handling, mailbox rules, and whether the recipient is on the same server or an external server.
  7. Check server load and software versions: Because you have high email traffic, examine CPU, memory, disk I/O, database performance, and SmarterMail service logs around the affected timestamps. Verify that SmarterMail and Outlook are running supported, up-to-date versions.
My recommendation: Start by comparing Sent Items in SmarterMail webmail against Outlook for the same message. This will help determine whether the problem is related to message storage on the server or synchronization with Outlook. If the message is missing from the server as well, provide SmarterTools support with the affected user, exact timestamp, message ID, and relevant logs so they can investigate the submission and mailbox-storage process.
Avoid enabling unrestricted detailed logging on the production server until you have a safe, limited logging strategy, since you have already observed significant performance problems.
Thomas Sangster Replied

I would not recommend adding IIS Basic Authentication directly to the SmarterMail webmail site when IIS is acting as a reverse proxy. SmarterMail handles its own authentication, and enabling Basic Authentication at the IIS layer can interfere with the authentication headers, cookies, and requests required by the application. It may also cause authentication prompts or prevent users from logging in correctly.

A better solution is to restrict access to the SmarterMail login page without breaking its authentication process.
Here are the options I would recommend:
  1. Restrict access by IP address: If users connect from known office IP addresses or through a VPN, configure IIS IP Address and Domain Restrictions to allow only trusted addresses. Make sure this restriction does not unintentionally block remote users or required services.
  2. Use a VPN: For an organization where webmail is intended only for employees, restricting access to the webmail interface through a VPN is generally a stronger approach than adding a second login prompt.
  3. Use a separate reverse proxy or access gateway: If you need an additional authentication layer, use a proxy or identity-aware gateway that explicitly supports SmarterMail's authentication flow, WebSockets if required, and all necessary application paths. Test the complete login, logout, session renewal, and mailbox access workflows before deploying it.
  4. Keep IIS Basic Authentication separate from the application: If you still want to test Basic Authentication, use a separate test site or staging environment first. Do not assume that enabling it on a static website proves it will work with SmarterMail. A reverse proxy may forward authentication headers differently, and the application may not support the extra authentication challenge.
  5. Strengthen SmarterMail's own security: Keep SmarterMail updated, use HTTPS, enforce strong passwords and multifactor authentication where supported, and configure appropriate account lockout or brute-force protection.
Important: IIS Basic Authentication alone does not necessarily secure the login page as intended. It uses HTTP authentication credentials, so HTTPS is essential. Also, do not enable it across the entire site without testing because it could block access to resources or endpoints that SmarterMail needs.
For a precise configuration, the key detail is whether IIS is using URL Rewrite with Application Request Routing (ARR) to proxy requests to SmarterMail, and which SmarterMail version you are running. Those details determine whether an IIS-level authentication layer can be implemented safely in your setup.


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