For the day you upgraded and any day you've booted your server, there should be a conversion.log created in C:\SmarterMail\Logs (or wherever your log directory is), could you skim this log looking for any lines containing the word "error" or "exception"? You can post a snippet here and we might be able to figure out what it is. If this is something you need immediately, maybe consider sending in a support ticket. If it's not obvious with the snippet we may need to access the server or interface, hence why a ticket may be needed.
Matt Petty
Senior Software Developer
SmarterTools Inc.
www.smartertools.com